Some of our published papers

2022

Nikitushkin V, Shleeva M, Loginov D, Dyčka F, Sterba J, Kaprelyants A. Shotgun proteomic profiling of dormant, ‘non-culturable’ Mycobacterium tuberculosis. PLOS ONE. 2022. accepted

Selinger M, Věchtová P, Tykalová H, Ošlejšková P, Rumlová M, Štěrba J, Grubhoffer L. Integrative RNA profiling of TBEV-infected neurons and astrocytes reveals potential pathogenic effectors. Computational and Structural Biotechnology Journal. 2022. 20:2759-2777. https://doi.org/10.1016/j.csbj.2022.05.052

2021

Jiří Kratochvíl, Vadym Prysiazhnyi, Filip Dyčka, Ondřej Kylián, Peter Kúš, Petr Sezemský, Ján Štěrba, Vítězslav Straňák. Gas aggregated Ag nanoparticles as the inorganic matrix for laser desorption/ionization mass spectrometry. Applied Surface Science. 2021, 541, 148469. https://doi.org/10.1016/j.apsusc.2020.148469

Rusanov AL, Kozhin PM, Tikhonova OV, Zgoda VG, Loginov DS, Chlastáková A, Selinger M, Sterba J, Grubhoffer L, Luzgina NG. Proteome profiling of PMJ2-R and primary peritoneal macrophages. International Journal of Molecular Sciences. 2021; 22(12):6323. https://doi.org/10.3390/ijms22126323

Azinfar A, Nueber S, Vancova M, Sterba J, Stranak V, Helm C. Self-patterning polyelectrolyte multilayer films: influence of deposition steps and drying in vacuum. Langmuir. 2021; Accepted. https://doi.org/10.1021/acs.langmuir.1c01409

Hejduk L, Rathner P, Strnad M, Grubhoffer L, Sterba J, Rego ROM, Müller N, Rathner A. Resonance assignment and secondary structure of DbpA protein from the European species, Borrelia afzelii. Biomol NMR Assign 2021, 15(2), 415-420. https://doi.org/10.1007/s12104-021-10039-2

Forinová, Michala; Pilipenco, Alina; Víšová, Ivana; Lynn Jr., N. Scott; Dostalek, Jakub; Mašková, Hana; Hönig, Václav; Palus, Martin; Selinger, Martin; Kočová, Pavlína ; Dyčka, Filip; Štěrba, Jan; Houska, Milan; Vrabcová, Markéta; Horák, Petr; Anthi, Judita; Tung, Chao-Ping; Yu, Chung-Ming; Chen, Chi-Yung ; Huang, Yu-Chuan; Tsai, Pei-Hsun; Lin, Szu-Yu; Hsu, Hung-Ju; Yang, An-Suei; Dejneka, Alexandr; Vaisocherová-Lísalová, Hana. Functionalized terpolymer brush-based biointerface with improved antifouling properties for ultra-sensitive direct detection of virus in crude clinical samples. ACS Applied Materials & Interfaces, 2021, 13, 60612-60624. https://doi.org/10.1021/acsami.1c16930

Štěrbová J., Kočová P., Pekarek L. Selinger M., Ondrus J. Grubhoffer L., Štěrba J. Click-on-membrane for detection of metabolically labelled proteins and RNA. Chemické listy, 2021, 115: 662-668.

2020

K. Kotsarenko, P. Vechtova, Z. Hammerova, N. Langova, L. Malinovska, M. Wimmerova, J. Sterba, and L. Grubhoffer. Newly identified DNA methyltransferases of Ixodes ricinus ticks. Ticks and tick-borne diseases, 2020, 11:101348.         https://doi.org/10.1016/j.ttbdis.2019.101348

Rusanov AR, Stepanov AA, Zgoda V, Kaysheva A, Selinger M, Maskova H, Lginov D, Sterba J, Grubhoffer L, Luzgina NG. Proteome dataset of mouse macrophage cell line infected with tick-borne encephalitis virus. Data in Brief. 2020, 28:105029.  https://doi.org/10.1016/j.dib.2019.105029

Loginov DS, Böttinger K, Loginova YF, Dycka F, Vechtova P, Sterba J. Biotyping of IRE/CTVM19 tick cell line infected by tick-borne encephalitis virus. Ticks Tick Borne Dis. 2020;11(4):101420. https://doi:10.1016/j.ttbdis.2020.101420

Vaidulych M, Pleskunov P, Kratochvíl J, Mašková H, Kočová P, Nikitin D, Hanuš J, Kylián O, Štěrba J, Biederman H, Choukourov, A. Convex vs concave surface nano-curvature of Ta2O5 thin films for tailoring the osteoblast adhesion, Surface and Coatings Technology, 2020, 393, 125805. https://doi.org/10.1016/j.surfcoat.2020.125805.

Vechtova P, Fussy Z, Cegan R, Sterba J, Erhart J, Benes V, Grubhoffer L. Catalogue of stage-specific transcripts in Ixodes ricinus and their potential functions during the tick life-cycle. Parasites Vectors 13, 311 (2020). https://doi.org/10.1186/s13071-020-04173-4

Kotsarenko K, Vechtova P, Lieskovska J, Füssy Z, Cabral-de-Mello D, Rego R, Alberdi P, Collins M, Bell-Sakyi L, Sterba J, Grubhoffer L. Karyotype changes in long-term cultured tick cell lines, Scientific Reports  2020, 10, 13443. https://doi.org/10.1038/s41598-020-70330-5

2019

Dzyuba V, Sampels S, Ninhaus-Silveira A, Kahanec M, Veríssimo-Silveira R, Rodina M, Cosson J, Boryshpolets J, Selinger M, Sterba J, Dzyuba B, Sperm motility and lipid composition in internally fertilizing ocellate river stingray Potamotrygon motoro. Theriogenology, 2019, 130: 26-35. https://doi.org/10.1016/j.theriogenology.2019.02.029.

Vaidulych M, Shelemin A, Hanuš J, Khalakhan I, Krakovsky I, Kočová P, Mašková H, Kratochvíl J, Pleskunov P, Štěrba J, Kylián O, Choukourov A, Biederman H, Superwettable antibacterial textiles for versatile oil/water separation. Plasma Process Polym. 2019;e1900003. http://dx.doi.org/10.1002/ppap.201900003

Loginov DS, Loginova YF, Dycka F, Böttinger K, Vechtova P, Sterba J. Tissue-specific signatures in tick cell line MS profiles. Parasit Vectors, 2019, 12:212. https://doi.org/10.1186/s13071-019-3460-5.

Xin M, Niksirat H, Shaliutina-Kolesova A, Siddique MAM, Sterba J, Boryshpolets S, Linhart O. Molecular and subcellular cryoinjury of fish spermatozoa and approaches to improve cryopreservation. Reviews in Aquaculture, 2019,  , https://doi.org/10.1111/raq.12355

Kratochvíl J, Kahoun D, Kylián O, Štěrba J, Kretková T, Kousal J, Hanuš J, Vaclová J, Prysiazhnyi V, Sezemský P, Fojtíková P, Lieskovská J, Langhansová H, Krakovský I, Straňák V. Nitrogen enriched C:H:N:O thin films for improved antibiotics doping. Applied Surface Science, 2019, 494, 301-308. ISSN 0169-4332, https://doi.org/10.1016/j.apsusc.2019.07.135

Selinger M, Tykalová H, Štěrba J, Věchtová P, Vavrušková Z, Lieskovská J, Kohl A, Schnettler E, GrubhofferL. Tick-borne encephalitis virus inhibits rRNA synthesis and host protein production in human cells of neural origin. PLoS Negl Trop Dis, 2019, 13:e0007745. https://doi.org/10.1371/journal.pntd.0007745

  Xin, M.; Vechtova, P.; Shaliutina-Kolesova, A.; Fussy, Z.; Loginov, D.; Dzyuba, B.; Linhart, O.; Boryshpolets, S.; Rodina, M.; Li, P.; Loginova, Y.; Sterba, J. Transferrin Identification in Sterlet (Acipenser ruthenus) Reproductive System. Animals 2019, 9, 753. https://doi.org/10.3390/ani9100753

Prysiazhnyi V., Dycka F. Kratochvil J., Sterba, J. Stranak V. Gas-aggregated Ag nanoparticles for detection of small molecules using LDI MS. Analytical and Bioanalytical Chemistry. 2019, 412, 1037-1047. doi: https://doi.org/10.1007/s00216-019-02329-5

2018

Kratochvíl J, Kahoun D, Štěrba J, Langhansová H, Lieskovská J, Fojtíková P, Hanuš J, Kousal J, Kylián O, Straňák V. Plasma polymerized C:H:N:O thin films for controlled release of antibiotic substances. Plasma Process Polym. 2018; 15:e1700160. 10.1002/ppap.201700160

Xin M, Shaliutina-Kolesova A, Sterba J, Konik P, Boryshpolets S, Rodina M, Li P, Nian R, Linhart O. Impact of cryopreservation on sterlet, Acipenser ruthenus sperm motility and proteome. Animal Reproduction Science, 2018, 192, 280-9. https://doi.org/10.1016/j.anireprosci.2018.03.025

Kratochvíl J, Štěrba J, Lieskovská J, Langhansová H, Kuzminova A, Khalakhan I, Kylián O, Straňák V. Antibacterial effect of Cu/C:F nanocomposites deposited on PEEK substrates, Materials Letters, 2018, 230, 69-99. doi: https://doi.org/10.1016/j.matlet.2018.07.082

Xin, M., Sterba, J., Shaliutina-Kolesova, A. Dzyuba B, Lieskovska J, Boryshpolets S, Siddique MAM, Kholodnyy V, Lebeda I, Linhart O. Protective role of antifreeze proteins on sterlet (Acipenser ruthenus) sperm during cryopreservation. Fish Physiol Biochem, 2018, 44: 1527-33. https://doi.org/10.1007/s10695-018-0538-5

 Dominik Schwarz, Amelie K.J. Schoenenwald, Jörg Dörrstein, Jan Sterba, David Kahoun, Pavla Fojtíková, Josef Vilímek, Doris Schieder, Cordt Zollfrank, Volker Sieber, Biosynthesis of poly-3-hydroxybutyrate from grass silage by a two-stage fermentation process based on an integrated biorefinery concept, Bioresource Technology, 2018, 269, 237-245. https://doi.org/10.1016/j.biortech.2018.08.064

Vechtova P, Sterbova J., Sterba J, Vancova M, Rego ROM, Selinger M, Strnad M, Golovchenko M, Rudenko N, Grubhoffer L, A bite so sweet: the glycobiology interface of tick-host-pathogen interactions. Parasit Vectors, 2018, 11:594. https://doi.org/10.1186/s13071-018-3062-7

Kotsarenko K.V., Lylo V. V., Ruban T. P., Macewicz L.L, Lukash L.L. Effect of some biological agents on expression of the repair enzyme MGMT and the anti-Methyltransferase Antibody Recognizable Protein MARP in human cells in vitro // Biochemical Genetics. 2018. - Volume 56. - P. 459–477. https://doi.org/10.1007/s10528-018-9854-9.

2017

Selinger M, Wilkie GS, Tong L, Gu Q, Schnettler E, Grubhoffer L, Kohl A. (2017) Analysis of tick-borne encephalitis virus-induced host responses in human cells of neuronal origin and interferon-mediated protection. Appl Environ Microbiol. 83(15). https://doi.org/10.1099/jgv.0.000853

2016

Černý J, Selinger M, Palus M, Vavrušková Z, Tykalová H, Bell-Sakyi L, Štěrba J, Grubhoffer L, Růžek D.: Expression of a second open reading frame present in the genome of tick-borne encephalitis virus strain Neudoerfl is not detectable in infected cells. Virus Genes 2016, 1-8. 10.1007/s11262-015-1273-y

Dzyuba V, Słowińska M, Cosson J, Boryshpolets S, Štĕrba J, Rodina M, Linhart O, Dzyuba B.: Characterization of proteolytic and anti-proteolytic activity involvement in sterlet spermatozoon maturation. Fish Physiol Biochem, 2016, 42, 1755-66. 10.1007/s10695-016-0255-x

Shaliutina-Kolešová A, Kotas P, Štěrba J, Rodina M, Dzyuba B, Cosson J, Linhart O.: Protein profile of seminal plasma and functionality of spermatozoa during the reproductive season in the common carp (Cyprinus carpio) and rainbow trout (Oncorhynchus mykiss). Mol Reprod Develop, 2016, 83: 968-982. 10.1002/mrd.22737.

2015

Villar M, Ayllón N, Kocan KM, Bonzón-Kulichenko E, Alberdi P, Blouin EF, Weisheit S, Mateos-Hernández L, Cabezas-Cruz A, Bell-Sakyi L, Vancová M, Bílý T, Meyer DF, Sterba J, Contreras M, Rudenko N, Grubhoffer L, Vázquez J, de la Fuente J. Identification and characterization of Anaplasma phagocytophilum proteins involved in infection of the tick vector, Ixodes scapularis. PLoS One. 2015, 10, e0137237. 10.1371/journal.pone.0137237

Hönig V, Svec P, Halas P, Vavruskova Z, Tykalova H, Kilian P, Vetiskova V, Dornakova V, Sterbova J, Simonova Z, Erhart J, Sterba J, Golovchenko M, Rudenko N, Grubhoffer L.: Ticks and tick-borne pathogens in South Bohemia (Czech Republic) - Spatial variability in Ixodes ricinus abundance, Borrelia burgdorferi and tick-borne encephalitis virus prevalence. Ticks Tick Borne Dis, 2015, 6, 559-67. 10.1016/j.ttbdis.2015.04.010

2014

Sterba J., Vancova M., Sterbova J., Bell-Sakyi L., Grubhoffer L.: The majority of sialylated glycoproteins in adult Ixodes ricinus ticks originate in the host, not the tick. Carbohydrate Research, 2014, 389, 93-99. 10.1016/j.carres.2014.02.017